Microbial Discovery Forge

Philosophy

Catalog marine microbial diversity. Connect oceanographic sampling with microbial community composition and function for global-scale marine ecology research.

Data sources: PlanetMicrobe

Scale

2,371

samples

5,946

experiments

1,151

sampling_events

30

tables

Schema Browser

Tables (4)

sample 2,371 sampling_event 1,151 experiment 5,946 library

`sample` 2,371 rows

Column	Type	Description
`sample_id`	string	Primary Key
`schema_id`	string	Data schema reference
`accn`	string	Accession number
`locations`	string	Geographic locations
`number_vals`	string	Numeric metadata values
`string_vals`	string	String metadata values
`datetime_vals`	string	Temporal metadata values

Sample Queries

Get marine samples

SELECT *
FROM planetmicrobe_planetmicrobe.sample
LIMIT 20

Get sampling events

SELECT *
FROM planetmicrobe_planetmicrobe.sampling_event
LIMIT 20

Sub-Collections

planetmicrobe_planetmicrobe

View collection →

planetmicrobe_planetmicrobe_raw

View collection →

Start Exploring

Access the full PlanetMicrobe data through BERDL JupyterHub.

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PlanetMicrobe